Mining Candidate Genes for Leaf Angle in Brassica napus L. by Combining QTL Mapping and RNA Sequencing Analysis
文献类型： 外文期刊
作者： Peng, Aoyi 1 ; Li, Shuyu 2 ; Wang, Yuwen 2 ; Cheng, Fengjie 1 ; Chen, Jun 4 ; Zheng, Xiaoxiao 2 ; Xiong, Jie 2 ; Ding, Ge 2 ; Zhang, Bingchao 2 ; Zhai, Wen 4 ; Song, Laiqiang 2 ; Wei, Wenliang 1 ; Chen, Lunlin 2 ;
作者机构： 1.Yangtze Univ, Coll Agr, Jingzhou 434025, Peoples R China
2.Jiangxi Prov Key Lab Oil Crops Genet Improvement 2, Nanchang 330200, Peoples R China
3.Jiangxi Acad Agr Sci, Crop Inst, Nanchang 330200, Peoples R China
4.East China Univ Technol, Fuzhou Teachers Coll, Fuzhou 344000, Peoples R China
关键词： rapeseed; leaf angle; QTL mapping; transcriptome; cell wall
期刊名称：INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES （ 影响因子：4.9； 五年影响因子：5.7 ）
ISSN： 1661-6596
年卷期： 2024 年 25 卷 17 期
页码：
收录情况： SCI
摘要： Leaf angle (LA) is an important trait of plant architecture, and individuals with narrow LA can better capture canopy light under high-density planting, which is beneficial for increasing the overall yield per unit area. To study the genetic basis and molecular regulation mechanism of leaf angle in rapeseed, we carried out a series of experiments. Quantitative trait loci (QTL) mapping was performed using the RIL population, and seven QTLs were identified. Transcriptome analysis showed that the cell wall formation/biogenesis processes and biosynthesis/metabolism of cell wall components were the most enrichment classes. Most differentially expressed genes (DEGs) involved in the synthesis of lignin, xylan, and cellulose showed down-regulated expression in narrow leaf material. Microscopic analysis suggested that the cell size affected by the cell wall in the junction area of the stem and petiole was the main factor in leaf petiole angle (LPA) differences. Combining QTL mapping and RNA sequencing, five promising candidate genes BnaA01G0125600ZS, BnaA01G0135700ZS, BnaA01G0154600ZS, BnaA10G0154200ZS, and BnaC03G0294200ZS were identified in rapeseed, and most of them were involved in cell wall biogenesis and the synthesis/metabolism of cell wall components. The results of QTL, transcriptome analysis, and cytological analysis were highly consistent, collectively revealing that genes related to cell wall function played a crucial role in regulating the LA trait in rapeseed. The study provides further insights into LA traits, and the discovery of new QTLs and candidate genes is highly beneficial for genetic improvement.
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