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Population phylogenomic analysis and origin of mitochondrial DNA in Chinese domestic pig

文献类型: 外文期刊

作者: Huo, J. H. 1 ; Wei, Q. P. 1 ; Wan, M. C. 1 ; Liu, L. X. 1 ; Hu, L. F. 2 ; Zhou, Q. Y. 1 ; Xiong, L. G. 3 ; Yang, Q. 1 ; Wu, 1 ;

作者机构: 1.Jiangxi Acad Agr Sci, Inst Anim Sci, Nanchang, Peoples R China

2.Jiangxi Acad Agr Sci, Inst Qual & Safety & Stand Agr, Prod Res, Nanchang, Peoples R China

3.Jiangxi Acad Agr Sci, Human Resources Dept, Nanchang, Peoples R China

关键词: Chinese domestic pig;mitochondrial DNA;origin;phylogenomic analysis

期刊名称:MITOCHONDRIAL DNA PART A ( 影响因子:1.514; 五年影响因子:0.707 )

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收录情况: SCI

摘要: The genetic diversity of eight domestic pigs was analyzed using a hypervariable fragment in the mitochondrial (mt) DNA control region; a portion of the hypervariable control region (515 bp) was sequenced from 153 samples. Haplotype diversity and nucleotide diversity in Yushan black pig populations were significantly higher than other populations (p<0.01). A neighbor-joining tree was constructed from domestic pig mtDNA and five wild pigs. The results indicate that there are only small differences among individual pigs from different regions. Networks of the domestic pigs were constructed to better visualize the relationships between sequences. Each core haplotype was surrounded by a star-like pattern, consistent with recent population expansion.

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